QIAGEN OMICSOFT AND BIOMEDICAL KNOWLEDGE BASE

QIAGEN OmicSoft and Biomedical Knowledge Base

Identify mutation hotspots in a gene of interest

513 views April 08, 2020

In several cancers, IDH1 is frequently mutated at arginine 132, which alters the...

QIAGEN OmicSoft and Biomedical Knowledge Base

Identify associations between clinical variables

245 views September 16, 2019

To explore how a gene's expression level (or mutation, copy number, etc) correlates...

QIAGEN OmicSoft and Biomedical Knowledge Base

Subgroup sample expression data by multiple variables

136 views April 08, 2020

In OncoLand, each sample can be grouped by extensive metadata, including clinical...

QIAGEN OmicSoft and Biomedical Knowledge Base

Explore how gene mutations correlate with clinical variables

254 views June 25, 2020

To explore how a mutation in a gene correlates with clinical metadata, you can create a...

QIAGEN OmicSoft and Biomedical Knowledge Base

Identify other genes that are co-mutated with your gene of interest

342 views April 24, 2020

A SampleSet can be used to identify the gene(s) that tend to be mutated in correlation...

QIAGEN OmicSoft and Biomedical Knowledge Base

Visualize Co-mutation patterns with the Alteration Omicprint

204 views June 26, 2020

TCGALand contains several ways to interactively visualize co-mutation frequencies for a...

QIAGEN OmicSoft and Biomedical Knowledge Base

Visualize expression and alteration patterns with the Custom Query Omicprint

174 views May 26, 2020

In addition to visualizing mutation/copy number status, OmicPrints can display...

QIAGEN OmicSoft and Biomedical Knowledge Base

Visualize MTBP expression in tumor vs. normal breast cancer tissue

174 views June 25, 2020

A recent paper used TCGA data to show that cancer patients with higher...

QIAGEN OmicSoft and Biomedical Knowledge Base

Categorize breast tumor samples by MTBP expression quartiles

130 views August 27, 2020

Categorize breast tumor samples by MTBP expression quartiles, by categorizing different...

QIAGEN OmicSoft and Biomedical Knowledge Base

Filter and Group per-sample gene expression by a SampleSet

216 views June 26, 2020

When you create a SampleSet with at least one metadata column with multiple levels, you...