QIAGEN IPA

Pathway and network analysis on different types of lists with QIAGEN Ingenuity Pathway Analysis (IPA)

31 views
May 16, 2023
You may not have a typical transcriptomics dataset (i.e., a list of genes with differential expression), yet, you’d like to analyze a list of IDs. In this training, we will explore how to perform pathway and network analysis for lists of IDs in QIAGEN IPA.

Examples of lists that we’ll explore include:
• A gene/protein/metabolite list coming from a paper, generated in a lab or from a collaborator without differential expression
• A list of RS IDs for variants with or without numerical values such as p-values
• A list of proteins with Z-score (or other numerical value) calculated outside of IPA
• Other lists where you have mainly IDs and but no differential expression data

In this IPA training, you’ll learn how to:
• Upload and perform a pathway analysis (also known as core analysis) on a list of genes, proteins, metabolites or other types of IDs
• Open and investigate pathways and networks for understanding biological mechanisms
• Compare between analyses to identify similarities and differences for applications such as biomarker discovery
• Generate a custom network and contextualize it using public data

Related videos

QIAGEN IPA

Identifying novel drug targets in paraganglioma

24 views May 09, 2023

In disease research, understanding the key genes involved and how they...

QIAGEN IPA

Transcriptional response to animal feed supplemented with plant-based antimicrobials

19 views May 09, 2023

In recent years there has been a rapid trend to end use of antibiotic growth...

QIAGEN IPA

QIAGEN Ingenuity Pathway Analysis (IPA) for grant writing and publications with new features

52 views May 02, 2023

QIAGEN Ingenuity Pathway Analysis (IPA) represents a robust resource to aid...

QIAGEN IPA

Proteomics and phosphoproteomics data interpretation using QIAGEN Ingenuity Pathway Analysis

80 views May 02, 2023

In this QIAGEN IPA training, we’ll focus on interpreting proteomics and...