QIAGEN IPA

Pathway and network analysis on different types of lists with QIAGEN Ingenuity Pathway Analysis (IPA)

906 views
May 16, 2023
You may not have a typical transcriptomics dataset (i.e., a list of genes with differential expression), yet, you’d like to analyze a list of IDs. In this training, we will explore how to perform pathway and network analysis for lists of IDs in QIAGEN IPA.

Examples of lists that we’ll explore include:
• A gene/protein/metabolite list coming from a paper, generated in a lab or from a collaborator without differential expression
• A list of RS IDs for variants with or without numerical values such as p-values
• A list of proteins with Z-score (or other numerical value) calculated outside of IPA
• Other lists where you have mainly IDs and but no differential expression data

In this IPA training, you’ll learn how to:
• Upload and perform a pathway analysis (also known as core analysis) on a list of genes, proteins, metabolites or other types of IDs
• Open and investigate pathways and networks for understanding biological mechanisms
• Compare between analyses to identify similarities and differences for applications such as biomarker discovery
• Generate a custom network and contextualize it using public data

Related videos

QIAGEN IPA

Exploring COVID-19 implicated genes in QIAGEN IPA and OmicSoft Land Explorer

267,454 views April 01, 2020

Interested in learning more? Click here

QIAGEN IPA

Analyze, compare and contextualize your biological data with QIAGEN IPA

95,941 views June 07, 2023

Discover why QIAGEN Ingenuity Pathway Analysis (IPA) is more than just...

QIAGEN IPA

IPA Webinar: Part 1: Introduction to Ingenuity Pathway Analysis

40,552 views November 12, 2019

Learn how to quickly and easily identify significant pathways, discover...

QIAGEN IPA

IPA Webinar: Part 2: Formatting and Uploading Your Dataset into IPA

20,870 views November 12, 2019

IPA has broadly been adopted by the life science research community and is...