QIAGEN CLC Genomics

Beyond exomes: Ultrafast FASTQ to interpretation

184 views
May 09, 2023
QIAGEN CLC LightSpeed Module delivers an ultra-fast, end-to-end hereditary NGS FASTQ to VCF pipeline. LightSpeed takes raw FASTQ files generated by paired-end 150 bp sequencing protocols and performs quality trimming, adapter trimming, read mapping, deduplication, local realignment, QC and germline variant calling.


QIAGEN CLC Genomics Cloud computing software allows you to launch analyses from CLC Workbenches or CLC Servers for execution on Amazon Web Services (AWS).

For more details, visit https://digitalinsights.qiagen.com/explore/c/qpro-2367_an_clc-lig?x=QbXlDs#page=1 and
https://digitalinsights.qiagen.com/plugins/clc-cloud-module/

To start a trial of QIAGEN CLC Genomics Workbench Premium, visit:
https://digitalinsights.qiagen.com/products-overview/discovery-insights-portfolio/analysis-and-visualization/qiagen-clc-workbench-premium/

In this training, we’ll explore together:

• An overview of the QIAGEN CLC Genomics Workbench Premium platform
• An overview of the QIAGEN CLC Genomics Server and Cloud • Breaking the speed of light
• Why LightSpeed is arguably the fastest and cheapest-to-run hereditary FASTQ-to-VCF WGS pipeline available
• Benchmarks/comparisons
• Demo of lightspeed and cloud module for Fastq to VCF
• Plugin installation
• Download of reference(s)
• Workflow execution and results review

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