QIAGEN CLC Genomics
Pathogen detection in wastewater samples using QIAGEN CLC Genomics Workbench
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In this 90-minute training, you will learn how to easily analyze wastewater samples to detect pathogens (SARS-COV2, etc.) using QIAGEN CLC Genomics Workbench software.
You will learn how to:
• Importing reads
• Open and modify prebuilt workflow (analysis pipeline)
• Install and execute workflow
• Review QC reports
• Perform genome visualization
• Export the consensus sequence in FASTA format to upload to Pangolin
• Create a SNP tree of the consensus sequence and overlay Pangolin information
• Export graphical and tabular results
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