QIAGEN CLC Genomics
Single Cell ATAC sequence analysis
597 views
scATAC-seq (Single-Cell Assay for Transposase-Accessible Chromatin using sequencing) is a technique used in molecular biology to assess chromatin accessibility. Now with QIAGEN CLC Genomics Workbench Premium, we put the power of this growing technology at your fingertips.
In this webinar training, our QIAGEN Field Application Scientist will walk you through a typical scATAC-seq workflow. Topics covered will include:
• Read QC and deduplication
• Peak calling
• Finding nearby genes and transcription factor (TF) motif scans
• Automatically prediction of cell types and cluster
• Comprehensive QC report
• Various other visualization, such as UMAP plot, Dot plots, heat map, and Violin Plots
Related videos
QIAGEN CLC Genomics
QIAGEN CLC Main Workbench training
Day 1: QIAGEN CLC Main Workbench Speaker: Shawn Prince, Sr. Field...
QIAGEN CLC Genomics
Biologically interpret your RNA-seq data with knowledge-based IPA
This webinar will provide an overview of how to analyze data obtained from...
QIAGEN CLC Genomics
QIAGEN CLC Genomics Workbench 20 – scalable desktop software for NGS data analysis
In this webinar, Leif Schauser, Ph.D., Director Product Management Genome...
QIAGEN CLC Genomics
Data analysis on day one - Taxonomic and functional microbiome profiling with the Microbial...
In this webinar, we will introduce the scientist-friendly Microbial Genomics...