QIAGEN CLC Genomics

Single Cell ATAC sequence analysis

419 views
April 25, 2022
scATAC-seq (Single-Cell Assay for Transposase-Accessible Chromatin using sequencing) is a technique used in molecular biology to assess chromatin accessibility. Now with QIAGEN CLC Genomics Workbench Premium, we put the power of this growing technology at your fingertips.

In this webinar training, our QIAGEN Field Application Scientist will walk you through a typical scATAC-seq workflow. Topics covered will include:
• Read QC and deduplication
• Peak calling
• Finding nearby genes and transcription factor (TF) motif scans
• Automatically prediction of cell types and cluster
• Comprehensive QC report
• Various other visualization, such as UMAP plot, Dot plots, heat map, and Violin Plots

Related videos

QIAGEN CLC Genomics

RNA-seq and single-cell RNA-seq data analysis using QIAGEN CLC Genomics Workbench_Sep 22

1,927 views September 24, 2021

In this 90-minute training, users will learn how to easily analyze RNA-seq...

QIAGEN CLC Genomics

Part I: Single-cell RNA sequencing data analysis using QIAGEN CLC Genomics Workbench

163 views August 21, 2023

This two-part series will walk you through single-cell RNA sequencing...

QIAGEN CLC Genomics

QIAGEN CLC Main Workbench training

831 views November 21, 2022

Introduction to QIAGEN CLC Main Workbench • Alignment and tree construction...

QIAGEN CLC Genomics

Single-cell RNA-seq data analysis and Interpretation

1,125 views July 07, 2022

Slides from this training:...