QIAGEN CLC Genomics

Overlaying Expression Data onto UMAP Plots using the Single Cell Analysis Plugin

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April 03, 2025

In this video, we show how to color cells based on the expression of genes of interest in a UMAP.  We also demonstrate how to examine expression values from the plot in a selected group of cells.

 

Recent training  webinar and tutorial that includes UMAP plot generation from single-cell data:

 

Single-cell RNA-seq, cell hashing and spatial transcriptomics

Tutorial: Perform Single-Cell RNA Expression and Velocity Analysis

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