QIAGEN CLC Genomics

Metagenomics taxonomic profiling using QIAGEN CLC Genomics Workbench

265 views
July 28, 2023
QIAGEN CLC Microbial Genomics Module provides tools and workflows for many various bioinformatics applications, including microbiome analysis, isolate characterization, functional metagenomics and antimicrobial resistance characterization. The module supports the analysis of bacterial, viral and eukaryotic (fungal) genomes and metagenomes.

This training focuses on amplicon-based taxonomic profiling (16S/18S/ITS sequencing OTU clustering). Specifically, we’ll cover together:

• An overview of the different tools within QIAGEN CLC Microbial Genomics Module and the research areas supported

• Taxonomic profiling

• Importing data

• Utilization of metadata

• Downloading and managing references

• The OTU clustering workflow (analytical pipeline)

• Downstream processing of abundance tables

• Creating and exporting high-quality graphics

Related videos

QIAGEN CLC Genomics

Metagenomics and taxonomic profiling using amplicon sequence variants (ASVs)

300 views September 14, 2023

When it comes to taxonomic profiling of the microbiome, amplicon sequence...

QIAGEN CLC Genomics

Pathogen detection and variant analysis using hybrid capture technology and QIAGEN CLC Genomics...

152 views July 21, 2023

The detection and surveillance of pathogens such as respiratory viruses,...

QIAGEN CLC Genomics

Antimicrobial resistance (AMR) and multi-locus sequence typing (MLST) using QIAGEN CLC Genomics...

287 views June 28, 2023

You asked for it by popular demand, and we’re here to deliver. In this...

QIAGEN CLC Genomics

Pathogen detection in wastewater samples using QIAGEN CLC Genomics Workbench

196 views April 24, 2023

In this 90-minute training, you will learn how to easily analyze wastewater...