Discovery and Research

Calling, annotating and investigating genomic variants using QIAGEN CLC Genomics Workbench and QCII-T - May 27 2021

889 views
June 01, 2021
In this 90-minute training, attendees will learn how to call SNPs, MNPs and structural variants (insertions, deletions, inversions and copy number variants) using QIAGEN CLC Genomics Workbench. In addition, we will demonstrate how to annotate these variants using both QIAGEN CLC Genomics Workbench and QIAGEN Clinical Insight Interpret Translational (QCII-T).

In this training, we will discuss the following topics:
• Variant calling from FASTQ or BAM files using QIAGEN CLC Genomics Workbench
• Variant annotation using QIAGEN CLC Genomics Workbench and QCI-IT
• Filtering variants based on quality score, genetic analysis and biological context
• Identifying causal and actionable variants using the QIAGEN Knowledge Base (includes annotations from HGMD and COSMIC)
• Generating VCFs and tabular exports for further analysis in QIAGEN Ingenuity Pathway Analysis

Speaker: Sumana Chintalapudi, Ph.D., Field Application Scientist, QIAGEN Digital insights

Related videos

Discovery and Research

QIAGEN CLC Genomics Workbench 20 – scalable desktop software for NGS data analysis

3,480 views January 28, 2020

In this webinar, Leif Schauser, Ph.D., Director Product Management Genome...

Discovery and Research

Wastewater and COVID-19 data analysis using QIAGEN CLC Genomics Workbench

305 views February 11, 2022

In this 90-minute training, users will learn how to easily analyze wastewater...

Discovery and Research

Uncovering Genomic Evidence of SARS-CoV-2 Infection and Reinfection

199 views June 17, 2021

Is it possible to become reinfected with SARS-CoV-2? If so, how can we...

Discovery and Research

From data to biological insight using QIAGEN CLC Single Cell Module and QIAGEN IPA: Single-cell...

321 views June 11, 2021

Organ development during gestation is a complex series of hematopoietic...