Day 2: Analyzing RNA-seq data using QIAGEN CLC Genomics Workbench
Speaker: Araceli Cuellar, Ph.D., Field Application Specialist, QIAGEN Digital Insights
Topics:
• Introduction to QIAGEN CLC Genomics Workbench
• RNA-seq analysis
o Read mapping and generating gene and transcript count
o Heatmap
o Volcano plot
o Genome browser view
o Exporting data
o Sending data to QIAGEN Ingenuity Pathway Analysis (IPA)
• Other pipelines (variant calling, ChIP-seq, de novo assembly and more)