tv.qiagenbioinformatics.com

April 1, 2020 - 1 - OmicSoft DiseaseLand Core Capabilities Training - Elodie...

Wed, 28 Jan 2026 21:50:31 GMT

Supporting Biomarker Discovery One Cell at a Time - Introduction to QIAGEN...

Mon, 25 Aug 2025 10:45:44 GMT

Single-cell gene expression analysis helps biologists and bioinformaticians reveal complex and rare cell populations, uncover regulatory relationships among genes and analyze and visualize gene expression differences among different cell types, or within a unique cell type. In this talk we will explore new tools for analyzing, interpreting and explore scRNA-seq data and the underlying biology. We will also show how to integrate ‘omics datasets from different platforms to gain insights into the biology and molecular drivers of specific cell populations.
Objectives:
How to analyze scRNA-seq data without a bioinformatician or learning code.
How to leverage automatic cell annotation to streamline your workflow.
How to quickly comb millions of cells to identify

Click here to learn more.

IPA Webinar: Part 3: Search and Explore in IPA

Tue, 19 Aug 2025 10:17:49 GMT

IPA has broadly been adopted by the life science research community and is cited in thousands of articles for the analysis, integration, and interpretation of data derived from ‘omics experiments, such as RNA-seq, small RNA-seq, microarrays including miRNA and SNP, metabolomics, proteomics, and small scale experiments. Hosted by two QIAGEN Senior Scientists, this series will show you step-by-step how to implement and use IPA to get the most out of your data.

Part 3: Search and Explore in IPA

Learn how IPA’s knowledge and discovery tools can accelerate your research with the use of recent literature findings and assistance in hypothesis generation. This webinar will describe how to explore inter-related information about genes, biological pathways and more using interactive and customized tools. Leverage this information instantly without needing to upload your data.

Interested in learning more or trying IPA? Click here.

IPA Webinar: Part 1: Introduction to Ingenuity Pathway Analysis

Tue, 19 Aug 2025 10:17:07 GMT

Learn how to quickly and easily identify significant pathways, discover potential novel regulatory networks, and get the most out of your 'omics data!

Part 1: Introduction to the IPA Core Analysis

Learn how to view and interpret Core Analysis results in IPA, which allows you to relate the molecules in your dataset to information in the QIAGEN Knowledge Base. You will learn how to:

Uncover signaling and metabolic canonical pathways enriched in your data
Predict activation or inhibition of upstream regulators
Identify biological functions and diseases that are predicted to be increasing or decreasing
Generate causal hypotheses
Build networks describing potential molecular interactions of your dataset molecules
Compare your analyses to thousands of analyses created from public datasets

Interested in learning more or trying IPA? Click here.

IPA Webinar: Part 2: Formatting and Uploading Your Dataset into IPA

Thu, 10 Jul 2025 21:46:14 GMT

Part 2: Formatting and Uploading Your Dataset into IPA

Learn how to format your own data and upload it into IPA so that you can perform pathway visualization and various different types of analyses. Learn how to:

• Format and upload the data to be analyzed by IPA

• Explore your uploaded data and start an analysis

Interested in learning more or trying IPA? Click here.

QIAGEN CLC Genomics Workbench 20 – scalable desktop software for NGS data...

Thu, 10 Jul 2025 15:51:32 GMT

In this webinar, Leif Schauser, Ph.D., Director Product Management Genome Analysis, will review the latest features in the new QIAGEN CLC Genomics Workbench 20. The following topics will be covered:
• One-click solutions and expert tools for NGS data analysis
• Working with reads from various platforms (Illumina, IonTorrent, Oxford Nanopore, Pacific Biosciences, BGI/MGI)
• Tailored solutions for RNA-seq, DNA-seq and methylation
• Efficient algorithms for read trimming, mapping, de novo assembly and variant calling
• Effective management of reference data
• Scalable processing of many samples, with advanced workflow and reporting capabilities
• Easy installation on Windows, Mac and Linux

Interested in learning more?

Click here

Formatting and uploading your dataset into IPA

Tue, 01 Jul 2025 11:38:08 GMT

Learn how to format your own data and how to upload it into IPA. IPA can upload your experimental data to enable you to perform pathways visualization, literature searches on the molecules in the dataset, and to perform the many different types of analyses offered in IPA. In this webinar we will use gene expression data as an example dataset.

Interested in learning more?

Click here

Timestamp placements and descriptions:

0:00-2:09 Introduction to the webinar

2:10-3:44 Example dataset used for the live demonstration

3:45-7:58 Dataset formatting rules

7:59-8:57 Multiple Observation dataset example

8:58-11:42 Types of data measurement values you can use

11:43-13:03 Additional formatting rules

13:04-14:32 Uploading files from Cufflinks software

14:33-16:22 Live demo: where you can start the upload process

16:23-26:06 Uploading data with Core Analysis options

26:07-27:07 Setting up the type of Core Analysis to be used

27:08-29:21 Create Core Analysis page: General Settings

29:22-30:38 Create Core Analysis page: Network options

30:39-31:26 Create Core Analysis page: Other filtering options

31:27-32:57 Create Core Analysis page: Preview dataset options

32:58-34:31 Create Core Analysis page: Applying cutoffs

34:32-35:36 How to start the analysis

35:37-38:07 Summary of the webinar

38:08-end Customer Support and additional resources information

ChIP-seq, Histone-seq and Methyl-seq analysis using CLC Genomics Workbench

Thu, 26 Jun 2025 22:42:47 GMT

This training will focus on how a user can analyze their epigenomics data using QIAGEN CLC Genomics Workbench.

Specifically, the trainer will cover how to

• Import the raw sequencing data

• Download or import reference, metadata and other needed files

• Mapping reads to a reference genome

• Calling and visualizing peaks

• Export graphical and tabular results

In addition, per registrant feedback and the trainer discretion additional topics such as customizing the workflow, how to send data to Ingenuity Pathway Analysis and more may be covered.

De novo assembly, BLAST and genome finishing using CLC Genomics Workbench

Wed, 18 Jun 2025 15:20:48 GMT

This webinar will introduce users to the tools available for short reads (Illumina) as well as long reads (Oxford Nanopore, Pac Bio) de novo assembly in CLC Genomics Workbench. It will also go over other useful functionalities such as BLAST and genome finishing.

Participants will learn the following:

o Download and install needed plugins.

o Import data required for the analysis.

o Run the de novo assembly workflow.

o For long reads, improve a de novo assembly by polishing with short, high-quality reads.

o Map reads to a reference and visualize an assembly.

o For long reads, correct raw long reads for further analysis.

o Use BLAST to investigate the contigs.

o Analyze and assemble contigs through Genome Finishing tools.

RNA-seq analysis for long reads

Tue, 10 Jun 2025 16:43:30 GMT

This training will focus on how a user can analyze their long reads data using QIAGEN CLC Genomics Workbench.

Specifically, the trainer will cover how to

• Import the long reads data

• Download or import reference, metadata and other needed files

• Process such data and generate downstream RNA-seq outputs

• Export high resolution graphics and tables

In addition, per registrant feedback and trainer discretion additional topics such as customizing the workflow, how to send data to Ingenuity Pathway Analysis, Sankey plot and more may be covered.

Shotgun metagenomics taxonomic profiling using QIAGEN CLC Genomics Workbench

Tue, 03 Jun 2025 15:22:01 GMT

The QIAGEN CLC Microbial Genomics Module provides tools and workflows for many bioinformatics applications, including microbiome analysis, isolate characterization, functional metagenomics and antimicrobial resistance characterization. The module supports the analysis of bacterial, viral and eukaryotic (fungal) genomes and metagenomes.

This training focuses on whole shotgun metagenomics taxonomic profiling. Specifically, we’ll cover:

• An overview of the different tools within QIAGEN CLC Microbial Genomics Module and the research areas supported

• Taxonomic profiling

• Importing data

• Utilization of metadata

• Downloading and managing references

• Taxonomic profiling workflow (analytical pipeline)

• Downstream processing of abundance tables

• Creating and exporting high-quality graphics

Multimodal panels analysis using QIAGEN CLC Genomics Workbench

Thu, 15 May 2025 10:53:39 GMT

This training will go over how QIAGEN CLC Genomics Workbench can be used to analyze Multimodal Panels data.

Trainer will cover

• How to import your data and metadata and download reference and other needed files

• How to use workflow and customize it

• How to visualize and export the results

DNA-seq (whole genome, whole exome, DNA-panel) analyses using QIAGEN CLC...

Thu, 24 Apr 2025 15:29:42 GMT

In this training, we’ll go over how to easily perform DNA-seq (specifically whole genome, whole exome, DNA-panel and similar) analyses easily and effectively using QIAGEN CLC Genomics Workbench.

Together, we’ll explore:

• Read mapping

• Variant calling (SNPs, mutations, Indels and more)

• Annotations and filters

• Genome browser view

Please bring any questions you may have, and we will answer them during this training.

Isolate Typing, Strain Identification and Antimicrobial Resistance Analyses...

Tue, 22 Apr 2025 08:00:36 GMT

QIAGEN CLC Genomics Workbench provides tools and workflows for a broad range of bioinformatics applications, including microbiome analysis, isolate characterization through SNP and K-mer trees using NGS data, and antimicrobial resistance characterization. CLC Genomics Workbench is widely used for analyses of bacterial, viral and eukaryotic (fungal) genomes and metagenomes.

Topics covered in this webinar include:

I. Overview of different tools within MGM application and research areas supported

II. II. Focused review of isolate typing and characterization

III. a. How to import data

IV. b. Using metadata

V. c. Downloading and managing references, including databases of isolates/resistances/MLST

VI. d. Walkthrough of the "Type a Known Species" workflow and review of details for each isolate

VII. e. Creating SNP profiles to specific reference

VIII. f. Generate a SNP tree for isolate comparison

IX. g. Export tabular and high-quality graphical outputs in wide range of file formats

Workflow construction and customization using QIAGEN CLC Genomics Workbench

Wed, 16 Apr 2025 01:54:25 GMT

Recently we have received some requests from CLC users (as well as CLC RNA-seq certification participants) to go over workflow construction and customization using CLC Genomics Workbench. Accordingly, we are hosting this training. The term workflow refers to bioinformatics secondary analysis pipelines such as DNA-seq, RNA-seq, OTU clustering, de novo assembly and more offered by CLC Genomics Workbench.

In this training, the trainer will go over

• The basics of workflow construction

• How to visualize different steps of the workflow and customize different settings

• How to edit workflows (add/remove steps, lock/unlock parameters and more)

• How to share workflows

• How to install workflows

• Other workflow related topics

Overlaying Expression Data onto UMAP Plots using the Single Cell Analysis...

Thu, 03 Apr 2025 12:50:28 GMT

In this video, we show how to color cells based on the expression of genes of interest in a UMAP. We also demonstrate how to examine expression values from the plot in a selected group of cells.

Recent training webinar and tutorial that includes UMAP plot generation from single-cell data:

Single-cell RNA-seq, cell hashing and spatial transcriptomics

Tutorial: Perform Single-Cell RNA Expression and Velocity Analysis

Finding the Perfect CLC Tool for your Workflow

Thu, 03 Apr 2025 12:49:05 GMT

Here are some quick tips on locating tools in CLC Genomics Workbench version 25+

Visualizing Spatial Transcriptomics Data in CLC Genomics Workbench

Thu, 03 Apr 2025 12:47:47 GMT

How to import and visualize spatial transcriptomics data in CLC

Installing CLC Network License manager and Downloading Network Licenses on...

Thu, 03 Apr 2025 12:46:31 GMT

How to install the CLC network license manager, network licenses, and CLC Genomics Workbench on Windows

Convenient Way To Launch Analysis Tools from UMAP Plots in the Single Cell...

Thu, 03 Apr 2025 12:45:27 GMT

In this video, we demonstrate the different tools that can be launched directly from the UMAP plot with a simple right-click.

Recent training webinar and tutorial that includes UMAP plot generation from single-cell data:

Single-cell RNA-seq, cell hashing and spatial transcriptomics

Tutorial: Perform Single-Cell RNA Expression and Velocity Analysis

Importing Single Cell Data into CLC Genomics Workbench

Thu, 03 Apr 2025 12:44:12 GMT

Single cell expression matrices can be imported into CLC manually using the import single cell matrix tool or they can be imported automatically using workflows. https://resources.qiagenbioinformatics.com/manuals/clcsinglecellanalysis/current/index.php?manual=Import_Expression_Matrix.html

Precise Workflow Path Control using Branching Elements

Thu, 03 Apr 2025 12:42:35 GMT

Direct outputs through a workflow based on sequence count, coverage, and sample quality using branching elements https://resources.qiagenbioinformatics.com/manuals/clcgenomicsworkbench/current/index.php?manual=Branching_elements.html

Wrapping external applications into QIAGEN CLC Genomics Workbench

Thu, 27 Mar 2025 09:48:58 GMT

QIAGEN’s CLC bioinformatics software portfolio provides user-friendly and intuitive solutions that run on any platform. This helps scientists to focus on the biology of their research without requiring them to write code, or compile and run software from the command line.

At QIAGEN we understand, however, that no single piece of software can meet the needs of every bioinformatics challenge. Sometimes, you need to supplement standard pipelines with your own scripts, open-source tools or third party applications from the command-line.

Accordingly, this training will go over:

• A quick introduction to CLC Genomics Workbench

• Wrapping an external application into the CLC environment

• Running external application alongside CLC tools and exporting results.

RNA-seq data analysis using QIAGEN CLC Genomics Workbench

Tue, 25 Mar 2025 12:35:35 GMT

For RNA-seq data, you will learn how to:

• Import FASTQ files, cell matrix files and metadata and how to download references

• Map reads to a reference genome and generate gene and transcript counts and QC reports displaying % mapped reads, knee plots, etc.

• Generate visualizations of results, such as heatmaps, differential expression tables, PCA/PCOA plots, Venn diagrams, sankey plot and others

• Easily customize RNA-seq workflows • Export publication-quality graphics, tables and reports

Per audience request

• Send differential expression tables to QIAGEN Ingenuity Pathway Analysis directly from QIAGEN CLC Genomics Workbench to analyze and interpret relevant pathways

Analysis of microbial communities for biotransformation, biodegradation and...

Tue, 25 Mar 2025 11:01:07 GMT

Geomicrobiology and petroleum microbiology are important fields that study how microbes interact with geological, geochemical, and petroleum processes. Understanding the composition of microbial communities can advance our knowledge of biotransformation, biodegradation, and bioremediation in industries such as environmental engineering, mining, and oil and gas.

QIAGEN CLC Genomics Workbench and the Microbial Genomics Module provide tools and workflows for a broad range of bioinformatics applications, including microbiome analysis, isolate characterization, and functional metagenomics. This webinar will focus on amplicon-based taxonomic profiling (16S/18S/ITS sequencing OTU clustering) using data collected from oil reservoirs. Specifically, the trainer will be:

• Highlighting different tools within the MGM application and research areas supported

• For taxonomic profiling:

o Importing data

o Utilizing metadata

o Downloading and managing references

o Launching the OTU clustering workflow (analytical pipeline)

• Downstream processing of abundance tables

• Creating and exporting high-quality graphics

Long reads analysis with QIAGEN CLC Genomics Workbench

Tue, 25 Feb 2025 20:59:02 GMT

Workflow construction and customization using QIAGEN CLC Genomics Workbench

Thu, 13 Feb 2025 16:06:53 GMT

In this training, the trainer will go over

• The basics of workflow construction

• How to visualize different steps of the workflow and customize different settings

• How to edit workflows (add/remove steps, lock/unlock parameters and more)

• How to share workflows

• How to install workflows

• Other workflow related topics

What's new in QIAGEN CLC Genomics version 25

Sun, 26 Jan 2025 23:17:36 GMT

Single - cell RNA-seq, cell hashing and spatial transcriptomics

Thu, 23 Jan 2025 13:42:27 GMT

In this training, you will learn how to analyze and interpret your own single cell RNA-seq data using QIAGEN CLC Genomics Workbench starting with either FASTQ or matrix files.

Using CLC Genomics Workbench, you will learn how to perform secondary analysis on your single cell RNA-seq data. Specifically, you will learn how to:

• Import your raw FASTQ or processed cell-matrix files.

• Use pre-configured but customizable pipelines/workflows for single cell RNA-seq data.

• Generate high resolution visuals and other files from your analysis for publications and biopharmaceutical discoveries.

o Dimension reduction (UMAP, t-SNE) plots

o Differential expression table for clusters, cell types, or combination of both

o Heat map

o Dot plots

o Violin plots

• Learn how to use “Create Cell Annotations from Hashtags” for cell hashing (i.e., CITE-seq).

• Dive into spatial transcriptomic analysis, the latest feature in the single cell RNA-seq module.

Sanger sequencing, alignment, cloning, primer design and more using QIAGEN...

Thu, 23 Jan 2025 12:52:40 GMT

This training will be relevant to both QIAGEN Main and Genomics workbench users and prospects who are interested in below analytics.

• Alignment and tree construction

• Sanger sequencing analysis

• Cloning and primer design

• Other molecular biology tools

Achieving Good Manufacturing Production (GxP) compliance with NGS

Tue, 22 Oct 2024 10:58:01 GMT

How decentralized and small labs can adopt high-throughput NGS analysis with...

Fri, 14 Jun 2024 23:53:55 GMT

Next-generation sequencing (NGS) has rapidly gained popularity as a diagnostic testing approach due to its unparalleled ability to comprehensively analyze genetic information with high throughput and precision. However, decentralized and small labs face significant hurdles when it comes to adopting NGS testing. From high upfront costs associated with acquiring the necessary equipment, to the complexity of bioinformatics tools and compliance management that require specialized expertise in data analysis and data security, adopting NGS poses challenges for labs with limited staff and infrastructure.

To empower small and decentralized labs to easily adopt NGS testing, QIAGEN has launched a new secondary analysis solution for oncology and inherited disease applications that enables high-throughput secondary analysis for use with any clinical NGS data. In this webinar, learn about QCI Secondary Analysis, an agnostic, cloud-based software-as-a-service (SaaS) solution that seamlessly integrates with QCI Interpret, QIAGEN’s clinical variant interpretation and reporting software, to deliver highly scalable and customizable Sample to Insight workflows for oncology and inherited disease applications.

In this webinar, attendees will learn how QCI Secondary Analysis:

. Streamlines analysis from a range of assay types, enabling labs to process more sequencing data without extensive time and resource investment.
. Ensures the highest degree of isolation and data protection, including compliance with ISO 27001, General Data Protect Regulation (GDPR), and the Health Insurance Portability and Accountability Act (HIPPA) requirements.
. Directly connects to QCI Interpret for an integrated and automated FASTQ-to-report workflow with limited hands-on time.

What’s new in QIAGEN CLC Genomics Workbench version 23

Fri, 03 Feb 2023 04:39:22 GMT

QIAGEN CLC Genomics Workbench version 23 is here with exciting updates we'd like to share with you. These include:

Our new QIAGEN CLC LightSpeed Module which provides the world’s fastest and cheapest whole genome sequencing (WGS) and (WES) analyses
Our new and improved QIAGEN CLC Cloud Module which provides direct access to your AWS S3 files and frees up your local workbench resources
New capabilities in QIAGEN CLC Microbial Genomics Module
New analyses in QIAGEN CLC Single Cell Analysis Module
New cloning tools
And many more new and improved workflow capabilities

Precisely target the causes of malignancy on a molecular level

Thu, 09 Jun 2022 14:16:00 GMT

Key to precision oncology is the development of expert databases that organize and standardize information on cancer-related genetic variants, as well as their associated diagnostic, prognostic, and therapeutic implications, in a way that is easily accessible to multiple users. COSMIC, the Catalogue of Somatic Mutations in Cancer, was established nearly 20 years ago, and has been a gold-standard resource for this data ever since. Today, COSMIC is used on a daily basis in research labs, cancer centers, biotech, and pharmaceutical companies, where it comes into play as one of the key, trusted sources to analyze genomic data.

In this webinar, Dr. Zbyslaw Sondka, COSMIC's Senior Scientist, and Rebecca White, COSMIC's Scientific Communications Manager, will walk you through 3 key-aspects of the industry leading somatic mutation database.

At the conclusion of this webinar, participants will be able to:

· Apply the breadth and depth of COSMIC's high-quality somatic mutation data to identify proteins, biological processes, and pathways driving disease, which can be used to design new therapeutic approaches that precisely target causes of the malignancy on a molecular level.

· Use tools and resources within COSMIC to bring actionable meaning to genomic data, such as the identification of driver mutations, functional biological consequences, and clinically significant somatic variants, which can aid diagnostics and treatment decisions.

· Explain how COSMIC's expert curation process enables the accumulation and integration of data on rare cancers (over 1500 unique cancer types have been recorded to date), and how this data could enable the development of cross-cutting solutions based on molecular behaviors and genetic similarities between cancers rather than their origin-location.

Human-certified ‘omics data to power drug discovery

Thu, 24 Feb 2022 17:02:21 GMT

Integrating external and internal ‘omics data is a key element of hypothesis generation, target identification, and biomarker prioritization when it comes to drug discovery. It is never as straightforward as it seems and usually costs more, takes more time than anticipated, often with poor results. In this talk, Joseph Pearson, PhD, from QIAGEN Digital Insights will discuss approaches and resources to overcome these obstacles and improve outcomes.

Participants will learn:
• Where automated curation approaches can leave you short
• Why data scientists spend most of their time not doing data science
• Where bioinformaticians and data scientist spend most of their time
• What is required of high-quality ‘omics data
• Example of high-quality TCGA data
• How to extend these practices to internal data structures

To learn more visit: https://digitalinsights.qiagen.com/products-overview/discovery-insights-portfolio/qiagen-omicsoft

Identify meaningful mutations in somatic tumor testing

Mon, 14 Feb 2022 14:54:55 GMT

From Information Overload to Actionable Insights

Precision medicine is transforming cancer care, with next-generation sequencing (NGS) enabling the simultaneous analysis of multiple genomic alterations with therapeutic implications. However, due to the sporadic nature of somatic cancers and the increasing uptake of NGS testing, the number of detected variants is exponentially growing, challenging labs to confidently identify meaningful mutations that could influence or improve decisions at the point of care. Approximately 50 percent of the oncologists in the United States find NGS results sometimes or often difficult to interpret, while 31 percent of small to medium-sized labs in Europe view a lack of knowledge and exposure to routine analyses and interpretation as the most critical bottleneck in NGS testing [1-2].

In this webinar, Ana Krivokuca will present a real-world use case of how the Institute for Oncology and Radiology of Serbia (IORS), a national cancer research center that provides routine NGS testing for cancer patients, uses the Human Somatic Mutation Database (HSMD) in their NGS testing pipeline to validate, assess, and better understand the clinical significance of detected variants.

A new somatic database from QIAGEN, HSMD combines two decades of expert-curated content with data from over 300,000 real-world clinical oncology cases to provide deep genomic insight into the molecular characterizations of a patient’s tumor. Easy to search with new content added weekly, HSMD enables users to explore key genes or mutations with driving properties or clinical relevance, search for associated treatment options, evaluate secondary findings, and develop customized gene panels.

Attendees will:

Learn how IORS uses HSMD to identify actionable variants, analyze complex reports, evaluate secondary findings, and design custom gene panels.
Explore HSMD content and features through a virtual demonstration.
Receive a complimentary, five-day trial of HSMD.

Speaker:
Ana Krivokuca, PhD
Head of Department for Genetic Counseling
Institute for Oncology and Radiology of Serbia

Get expert variant classification services tailored to your onco-panel

Thu, 09 Dec 2021 07:22:05 GMT

As next-generation DNA sequencing technology continues to evolve and become further integrated into routine clinical testing, the need for efficient and accurate clinical interpretation of oncology diagnostic tests becomes even more pressing—especially among community hospital labs.

Standard sequencing panels are growing, drugs are covering more targets and pathways, and the expansion of the scientific and clinical literature has become exponential, presenting a significant challenge to laboratory directors and clinicians who need to understand the implications of the test results. Further, the implications of mutations can be applicable across many cancer types, but often are different based on the specific cancer type.

In this webinar, we will discuss how community hospital labs can perform comprehensive genomic profiling faster and with greater accuracy and confidence using QIAGEN’s professional clinical interpretation services: QCI Precision Insights.

Attendees will learn:

About the world-class team of molecular biologists and oncologists that power QCI Precision Insights
How community hospital labs can get up-to-date and detailed disease-specific clinical insights and therapeutic options for each patient within minutes
About use-cases and examples of clinical annotation in different diseases of varying specificity

Speakers
Sheryl Elkin, PhD
Chief Scientific Officer
N-of-One, a QIAGEN company

Linda Call, Ph.D.
Director of Scientific and Clinical Operations
QIAGEN Digital Insights

Variant Calling to Biological Insights – A Lynch Syndrome Case Study

Thu, 09 Dec 2021 07:19:18 GMT

In this webinar, we present a case study on Lynch syndrome (LS), a hereditary condition characterized by a high risk of colorectal cancer, endometrial cancer, and other neoplasia that typically manifests in the context of germline variants in DNA mismatched genes.
To study whether other germline pathogenic variants of hereditary cancer genes are present in patients previously diagnosed with LS, the researchers analyzed a comprehensive panel of cancer-predisposing genes by NGS among 84 LS probands.

With this study as an example, we will illustrate how you can use your own data and public data to conduct translational research using 3 software solutions from QIAGEN.

This webinar will focus on the following elements:

Data analysis – How you can efficiently retrieve and process FASTQ data with accurate variant interpretation using CLC Genomics Workbench
Interpretation – How you can take a set of variants and rapidly assess sample variants for disease relevance and pathogenicity using QCI Interpret Translational
Discovery – How you can combine results and contextualize variant biomarkers with other public datasets using QIAGEN Ingenuity Pathway Analysis (IPA)

Speaker:

Eric Seiser, PhD
Senior Field Applications Scientist
QIAGEN Digital Insights